Department of Science

2024

A computational predictor for autophagy-related proteins using interpretable machine learning and genetic algorithm

Nguyen, N. T. K., Vo, T. H., Lin, S. H. & Le, N. Q. K., 01 Mar 2024, In: Gene Reports. 34, 101876.

Research output: Contribution to journal › Article › peer-review

Antimicrobial activity of natural mollusc shells: A review

Brakemi, E., Michael, K., Tan, S. P. & Helen, H., 01 Feb 2024, In: Process Biochemistry. 137, p. 122-133 12 p.

Research output: Contribution to journal › Article

2 Citations (Scopus)

A tutorial review for research laboratories to support the vital path toward inherently sustainable and green synthetic chemistry

Kernaghan, S. M., Coady, T., Kinsella, M. & Lennon, C. M., 15 Jan 2024, In: RSC Sustainability. 2, 3, p. 578-607 30 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Citations (Scopus)

Bile acid/fatty acid integrated nanoemulsomes for nonalcoholic fatty liver targeted lovastatin delivery: stability, in-vitro, ex-vivo, and in-vivo analyses

Syed, A. F., 03 May 2024, In: Expert Opinion on Drug Delivery. 21, 5, p. 779-796 18 p.

Research output: Contribution to journal › Article › peer-review

Circulating Angiogenic and Senescent T Lymphocytes in Ageing and Frailty

Byrne, T., Cooke, J., McNeela, E., Bambrick, P., Murphy, R. P. & Harrison, M., Aug 2024, In: Journal of Frailty and Aging. 13, 3, p. 203-212 10 p.

Research output: Contribution to journal › Article › peer-review

Design of liposomal nanocarriers with a potential for combined dexamethasone and bevacizumab delivery to the eye

Farooq, U., O'Reilly, N., Ahmed, Z., Gasco, P., Singh, T. R. R., Behl, G., Fitzhenry, L. & McLoughlin, P., 01 Apr 2024, In: International Journal of Pharmaceutics. 654, p. 123958 123958.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Citation (Scopus)

Development and characterization of a spray-dried inhalable ternary combination for the treatment of Pseudomonas aeruginosa biofilm infection in cystic fibrosis

Alhajj, N., Yahya, M. F. Z. R., O'Reilly, N. J. & Cathcart, H., 01 Jan 2024, In: European Journal of Pharmaceutical Sciences. 192, p. 106654 106654.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Citation (Scopus)

Development of a rapid quantitative method of analysis of carbohydrate fatty acid ester reaction mixtures using ¹H qNMR

Nayak, A., Dunne, J., Kinsella, M. & Lennon, C. M., Jun 2024, In: Carbohydrate Research. 540, 109143.

Research output: Contribution to journal › Article › peer-review

Open Access

Effect of creep feeding pelleted starter diet, liquid milk replacer and a liquid mixture of starter diet and milk replacer to suckling pigs on their growth and medication usage

Arnaud, E. A., Gardiner, G. E., Chombart, M., O' Doherty, J. V., Sweeney, T. & Lawlor, P. G., 01 Jan 2024, In: Translational Animal Science. 8, p. txae041 txae041.

Research output: Contribution to journal › Article › peer-review

Open Access

Effect of implementing an effective farrowing accommodation hygiene routine on clinical cases of disease, medication usage, and growth in suckling and weaned pigs

Halpin, K. M., Lawlor, P. G., Arnaud, E. A., Teixé-Roig, J., O' Doherty, J. V., Sweeney, T., O' Brien, T. M. & Gardiner, G. E., 01 Jan 2024, In: Translational Animal Science. 8, p. txae095 txae095.

Research output: Contribution to journal › Article › peer-review

Open Access

Effect of supplemental milk replacer and liquid starter diet for 4 and 11 days postweaning on intestinal parameters of weaned piglets and growth to slaughter

Vasa, S. R., Gardiner, G. E., Arnaud, E. A., O'Driscoll, K., Bee, G. & Lawlor, P. G., 01 Sep 2024, In: Animal. 18, 9, 101271.

Research output: Contribution to journal › Article › peer-review

Open Access

Factors influencing the carbon footprint of milk production on dairy farms with different feeding strategies in western Europe

Sorley, M., Casey, I., Merino, P., Trindade, H., Mulholland, M., Resch Zafra, C., Keatinge, R., Le Gall, A., O'Brien, D. & Humphreys, J., 01 Jan 2024, In: Journal of Cleaner Production. 435, 140104.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Citation (Scopus)

General aspects of powder rheology applied to pharmaceutical formulations

Mariano, M., 01 May 2024, In: Drug Discovery Today. 29, 5, 103976.

Research output: Contribution to journal › Review article › peer-review

Open Access

2 Citations (Scopus)

Genetic Lag in a Demographically Recovering Carnivore: The Case of the British Pine Marten (Martes martes)

O'Meara, D., 2024, In: Research Square.

Research output: Contribution to journal › Article

Improving corneal permeability of dexamethasone using penetration enhancing agents: First step towards achieving topical drug delivery to the retina

Thareja, A., Leigh, T., Hakkarainen, J. J., Hughes, H., Alvarez-Lorenzo, C., Fernandez-Trillo, F., Blanch, R. J. & Ahmed, Z., 20 Jul 2024, In: International Journal of Pharmaceutics. 660, p. 124305 124305.

Research output: Contribution to journal › Article › peer-review

Open Access

Investigation of novel combination therapy for age-related macular degeneration on ARPE-19 cells

Dandamudi, M., Fitzhenry, L., Rani, S., McLoughlin, P., Coffey, L. V. & Behl, G., 19 Apr 2024, In: Frontiers in Drug Delivery. 4

Research output: Contribution to journal › Article › peer-review

Open Access

miRNAs as biomarkers of therapeutic response to HER2-targeted treatment in breast cancer: A systematic review

Vo, T. H., EL-Sherbieny Abdelaal, E., Jordan, E., O'Donovan, O., McNeela, E. A., Mehta, J. P. & Rani, S., 01 Mar 2024, In: Biochemistry and Biophysics Reports. 37, p. 101588 101588.

Research output: Contribution to journal › Article › peer-review

Open Access

4 Citations (Scopus)

Nanomatryoshka as a nano-material for use in laser-induced hyperthermia in biological tissues: A multiphysics-based computational modeling approach

Abedini, M., Mohammadpour, R., Rafii-Tabar, H. & Sasanpour, P., 01 Feb 2024, In: International Journal of Thermal Sciences. 196, 108712.

Research output: Contribution to journal › Article › peer-review

1 Citation (Scopus)

On the role of excipients in biopharmaceuticals manufacture: Modelling-guided formulation identifies the protective effect of arginine hydrochloride excipient on spray-dried Olipudase alfa recombinant protein

Sharma, A., Cazade, P., Khamar, D., Hayden, A., Thompson, D. & Hughes, H., 05 Sep 2024, In: International Journal of Pharmaceutics. 662, p. 124466 124466.

Research output: Contribution to journal › Article › peer-review

Open Access

Optimising the hygiene of a liquid feeding system to improve the quality of liquid feed for pigs

Cullen, J. T., Lawlor, P. G., Viard, F., Lourenco, A., Gómez-Mascaraque, L. G., O’Doherty, J. V., Cormican, P. & Gardiner, G. E., 17 Jul 2024, In: Scientific Reports. 14, 1, p. 16516 16516.

Research output: Contribution to journal › Article › peer-review

Open Access

Rapid identification of natural acetylcholinesterase inhibitors from Glycosmis parviflora stem utilizing dereplication, in vitro and in silico approach

Thi Duong, T. L., Liu, T. W., Tran Huynh, Q. D., Nguyen, D. K., Wang, Y. H., Chu, M. H., Vo, T. H., Hsu, S. J. & Lee, C. K., 01 Jun 2024, In: Arabian Journal of Chemistry. 17, 6, 105811.

Research output: Contribution to journal › Article › peer-review

Open Access

SETU- Chemistry Laboratory Techniques video bank

Lennon, C. (Photographer), 2024

Research output: Non-textual form › Digital or Visual Products

The economic performance of grassland-based milk production using best practices to lower greenhouse gas and ammonia emissions

Cashman, O., Casey, I. & Humphreys, J., 01 Dec 2024, In: Agricultural Systems. 221, 104105.

Research output: Contribution to journal › Article › peer-review

Open Access

The Potential of Seaweeds as a Rich Natural Source for Novel Bioherbicide Formulation/Development

Chukwuma, O. C., Tan, S. P., Hughes, H., McLoughlin, P., O'Toole, N. & McCarthy, N., 15 May 2024, In: Weed Science. 72, 3, p. 216-224 9 p.

Research output: Contribution to journal › Article

Open Access

1 Citation (Scopus)

The pre-adoption characteristics of men in a community-based social initiative: who wants a game of ball?

Daly, S., Carroll, P., Egan, T., McGrath, A., Finnegan, L., Harrison, M., Richardson , N. & Krustrup, P., 28 Jan 2024, In: International Journal of Health Promotion and Education.

Research output: Contribution to journal › Article › peer-review

Open Access

2023

A comparison of aerobic- and resistance-emphasised exercise on cardiometabolic health and quality of life in men receiving androgen deprivation therapy for prostate cancer: Protocol for a feasibility trial

Murphy, K., Kehoe, B., Denieffe, S., Hacking, D., Fairman, C. M. & Harrison, M., 14 Nov 2023, In: Contemporary clinical trials. 136, p. 107388 107388.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Citation (Scopus)

Advances in laser-based surface texturing for developing antifouling surfaces: A comprehensive review

Cholkar, A., McCann, R., Perumal, G., Chatterjee, S., Swayne, M., Kinahan, D. & Brabazon, D., 01 Dec 2023, In: Applied Surface Science Advances. 18, 100513.

Research output: Contribution to journal › Article › peer-review

Open Access

7 Citations (Scopus)

ALDH2 as a potential stem cell-related biomarker in lung adenocarcinoma: Comprehensive multi-omics analysis

Tran, T. O., Vo, T. H., Lam, L. H. T. & Le, N. Q. K., 01 Jan 2023, In: Computational and Structural Biotechnology Journal. 21, p. 1921-1929 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

34 Citations (Scopus)

Analysis of miRNAs: Biomarkers for HER2-Targeted Breast Cancer Therapy

Vo, T. H., O’Donovan, O., McNeela, E., Mehta, J. P. & Rani, S., 31 Dec 2023, In: International Annals of Science.

Research output: Contribution to journal › Article › peer-review

An evaluation of hyaluronic acid and poly(L-lysine) polyelectrolyte complexes for intraocular nicotinamide adenine dinucleotide (NAD+) delivery.

Casey-Power, S., Ryan, R., Behl, G., Mc Loughlin, P., Fitzhenry, L., Byrne, M. E. & Vardar, C., 25 Apr 2023.

Research output: Contribution to conference › Poster › peer-review

A novel approach to the manufacture of dissolving microneedles arrays using aerosol jet printing

Ako, H., O'Mahony, J., Hughes, H., Mc Loughlin, P. & O'Reilly, N., Dec 2023, In: Applied Materials Today. 35, p. 101958 13 p., 101958.

Research output: Contribution to journal › Article › peer-review

Open Access

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5 Citations (Scopus)

4 Downloads (Pure)

Antibacterial plant combinations prevent postweaning diarrhea in organically raised piglets challenged with enterotoxigenic Escherichia coli F18

Jerez-Bogota, K., Jensen, M., Højberg, O., Cormican, P., Lawlor, P. G., Gardiner, G. E. & Canibe, N., 03 Apr 2023, In: Frontiers in Veterinary Science. 10, p. 1095160 1095160.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Citations (Scopus)

Application of the non-uniform Fourier transform to non-uniformly sampled Fourier transform spectrometers

Wen, M. & Houlihan, J., 01 Aug 2023, In: Optics Communications. 540, 129491.

Research output: Contribution to journal › Article › peer-review

3 Citations (Scopus)

Circulating inflammatory biomarker responses in intervention trials in frail and sarcopenic older adults: A systematic review and meta-analysis

Byrne, T., Cooke, J., Bambrick, P., McNeela, E. & Harrison, M., 01 Jun 2023, In: Experimental Gerontology. 177, 112199.

Research output: Contribution to journal › Article › peer-review

Open Access

11 Citations (Scopus)

Designing effective exercise intervention trials for prostate cancer cohorts: a qualitative study on experiences and views of exercise oncology researchers

Murphy, K., Denieffe, S., Kehoe, B., Hacking, D., Fairman, C. M. & Harrison, M., 30 Oct 2023, In: BMC Sports Science, Medicine and Rehabilitation. 15, 1, p. 145 145.

Research output: Contribution to journal › Article › peer-review

Open Access

DNA barcoding reveals an increased diversity within the genus Culex (Diptera: Culicidae) in Ireland: DNA barcoding reveals an increased diversity within the genus Culex (Diptera: Culicidae) in Ireland

Curran, T. G., O'Hanlon, A., Gallagher, F., Pedersen, R. S., Zintl, A., Isiye, E., Olmeda, A. V., O'Neill, D., McDevitt, A., O'Reilly, C. & O'Meara, D. B., 21 Dec 2023

Research output: Other contribution

Endogenous hydrogen sulfide inhibition suppresses tumor growth by promoting apoptosis and pyroptosis in esophageal cancer cells

Wang, H. G., Wang, D., Sarfraz, M., Afzal, A., Jing, M. R., Zhang, Y. X., Cai, C. B., Qi, H. W., Chen, H. J., Li, T., Hu, S. J., Liu, H. X., Ji, X. Y. & Wu, D. D., 01 Dec 2023, In: Translational Oncology. 38, p. 101770 101770.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Citations (Scopus)

Evaluating the phytotoxicities of two Irish red seaweeds against common weed species

Chukwuma, O. C., Tan, S. P., Hughes, H., McLoughlin, P., O’Toole, N. & McCarthy, N., 26 May 2023, In: Journal of Applied Phycology.

Research output: Contribution to journal › Article › peer-review

1 Citation (Scopus)

Evaluation and Screening of Biopharmaceuticals using Multi-Angle Dynamic Light Scattering

Sharma, A., Beirne, J., Khamar, D., Maguire, C., Hayden, A. & Hughes, H., 22 Mar 2023, In: AAPS PharmSciTech. 24, 4, p. 84 84.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Citation (Scopus)

Football Cooperative, a Community Based Physical Activity Social Initiative for Men: Protocol Paper for a Pragmatic Feasibility Trial

Carroll, P., Daly, S., Harrison, M., Egan, T., McGrath, A., Finnegan, L., Richardson, N. & Krustrup, P., 27 Apr 2023, In: Journal of Physical Activity Research. p. 16 26 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Green Synthesis of Pharmaceutically Relevant Beta-Hydroxy Ketones using Biocatalysis in Batch and Flow.

Kernaghan, S. M., Coady, T., Kinsella, M. & Lennon, C., 31 May 2023.

Research output: Contribution to conference › Poster

How patient/public involvement impacts the research journey – an overview of the visual impairment research field

Ames, T., Matthews, E., Reynolds, A., Fitzhenry, L., Logan, A., Gooney, M. & Filipe, H. P., 05 Sep 2023, In: Open Research Europe.

Research output: Contribution to journal › Article › peer-review

Immune System, Inflammation and Autoantigens in Wet Age-Related Macular Degeneration: Pathological Significance and Therapeutic Importance

Manikandan, S. K., Logan, A., Cerrada-Gimenez, M., Fitzhenry, L., Coffey, L., Kaja, S. & Rani, S., Dec 2023, In: Life. 13, 12, 2236.

Research output: Contribution to journal › Review article › peer-review

Open Access

Improved prediction of drug-drug interactions using ensemble deep neural networks

Vo, T. H., Nguyen, N. T. K. & Le, N. Q. K., 01 Feb 2023, In: Medicine in Drug Discovery. 17, 100149.

Research output: Contribution to journal › Article › peer-review

Open Access

22 Citations (Scopus)

Invasive genetic rescue: dispersal following repeated culling reinforces the genetic diversity of an invasive mammal

Synnott, R., Shuttleworth, C., Everest, D. J., Stevenson-Holt, C., O’Reilly, C., McDevitt, A. D. & O’Meara, D. B., Oct 2023, In: Biological Invasions.

Research output: Contribution to journal › Article › peer-review

1 Citation (Scopus)

Maternal and/or post-weaning supplementation with Bacillus altitudinis spores modulates the microbial composition of colostrum, digesta and faeces in pigs.

Rattigan, R., Lawlor, P. G., Cormican, P., Crespo-Piazuelo, D., Cullen, J. T., Phelan, J. P., Ranjitkar, S., Crispie, F. & Gardiner, G. E., Dec 2023, In: Scientific Reports. 13, 1, p. 8900 8900.

Research output: Contribution to journal › Article › peer-review

Open Access